Arthropod phospholipase D family

General
Activity on mammals

Phospholipase D (PLD) toxins are the most abundantly expressed toxic proteins in venoms of Loxosceles and Sicarius spiders (from the Sicariidae family). They are the primary agents responsible for loxoscelism, a spider-bite induced mammalian disease state whose symptoms are ulcer formation, edema and dermonecrosis and occasional severe systemic manifestations, such as circulatory shock, intravascular coagulation, acute renal failure and even death (Bey et al., 1997, da Silva et al., 2004, Tambourgi et al., 2010, Rosen et al., 2012 ).

PLD toxins from Loxosceles bind to mammalian cell surfaces (Wille et al., 2013 ) and have enzymatic activity against common phospholipids in mammalian tissue, including lysophosphatidylcholine (LPC) and sphingomyelin (SM) (Tambourgi et al., 2010, Lee and Lynch, 2005 ). The catalytic activity on these phospholipids is commonly assumed to be hydrolysis, resulting in liberation of choline and ceramide-1-phosphate (C1P) when SM is the substrate or lysophosphatidic acid (LPA) when LPC is the substrate (Lee and Lynch, 2005, van Meeteren et al., 2004 ). LPA, a known inducer of platelet aggregation, endothelial hyperpermeability, and pro-inflammatory responses, is thought to contribute to the pathology of loxoscelism (van Meeteren et al., 2004, van Meeteren et al., 2007 ) by some as yet undetermined mechanism. Using NMR and mass spectrometry, a recent study demonstrates that PLDs exclusively catalyze transphosphatidylation rather than hydrolysis, forming cyclic phosphate products from both SM and LPC (Lajoie et al., 2013 ). As is the case for the hydrolysis product LPA, cyclic phosphates may be relevant to the pathology of brown spider envenomation (Lajoie et al., 2013 ).


Figure 1: Transphosphatydilation reaction described in Lajoie et al. (2013) that results in production of cyclic phosphates and choline. A. PLD converts sphingomyelinase (SM) to cyclic ceramide(1,3)phosphate (CC(1,3)P). B. PLD converts lysophosphatidylcholine (LPC) to cyclic phosphatidic acid (16:0). (Reprinted from PLOS One, Lajoie et al., 2013 / distributed under the terms of the Creative Commons Attribution License).

Activity on insects
While PLDs are well known to cause dermonecrotic lesions in mammals, little work has investigated the bioactivity of this enzyme on its natural insect prey. In a recent study, Zobel-Thropp et al. (2012) produced a recombinant PLD from a Loxosceles species and compared its enzymatic and insecticidal activity to that of crude venom. PLD enzymatic activities of recombinant protein and crude venom from the same species were indistinguishable. In addition, PLD and crude venom have comparable and high potency in immobilization assays on crickets. These data indicate that PLD is a potent insecticidal toxin.

Nomenclature
Several names have been given to venom PLD from the Sicariidae family. By considering the biochemical aspect, the name phospholipase D (PLD) has been proposed by Lee and Lynch in 2005 to represent these enzymes that have been discovered to hydrolyse not only sphingomyelin but a more broad range of phospholipids. Hence, this term represents an accurate and broad denomination. Previously to this denomination, the name sphingomyelinase D (SMase D) was used due to its first biochemical description as enzymes capable of hydrolyzing sphingomyelin into choline and ceramide-1-phosphate (Kurpiewski et al., 1981 ). In the biological level, another name, dermonecrotic toxin is a term widely applied by toxinologists to Loxosceles PLDs, due to the hallmark of brown spider bites, which trigger dermonecrosis in mammals. Finally, the term of SicTox family members (for Sicariidae Toxin) has been given to represent the multigene family of venom PLD that are not homologous to other PLD families that are expressed for nonvenomous function. Hence, this term serves to emphasize this difference (Zobel-Thropp et al., 2012 ).

Structure and classification
These toxin proteins vary in molecular mass from 30 to 35 kDa, and include a signal peptide followed by a propeptide. The amino acid sequences of mature PLDs are highly conserved (55-99%), especially the residues essential for magnesium-ion binding and catalysis. The single polypeptide chain folds to form a distorted barrel where the inner barrel surface is lined with eight parallel β-strands linked by short flexible loops to eight α-helices that form the outer surface of the barrel (Murakami et al., 2005 ). This structural motif was first observed in the structure of the triose phosphate isomerase (TIM) and is referred to as a TIM barrel or as an (α/β)8 barrel. Based on sequence alignment, Murakami and colleagues (2006) have proposed a classification of spider venom PLD. The class I enzymes represented by SMase I from L. laeta possess a single disulfide bond and contain an extended hydrophobic loop (see entries ). All other proteins, represented by SMase D 1 from L. intermedia belong to class II, which contains an additional intrachain disulfide bond that links the shortened flexible loop with the catalytic loop (Fig.2) (see entries Another classification system has been proposed by Binford et al., 2009, that differs from the classes I and II classification. This classification is based on Bayesian phylogenies that support two major clades; alpha (see entries ) and beta (see entries ), within which seven and three subclades have been identified, respectively. Sequences in the alpha clade are exclusively from New World Loxosceles and Loxosceles rufescens and include published genes for which expression products have PLDs and dermonecrotic activity. The beta clade includes paralogs from New World Loxosceles that have no, or reduced, SMase D and no dermonecrotic activity and also paralogs from Sicarius and African Loxosceles of unknown activity.



Figure 2: Alignment of class I PLD (represented by SMase I ) from L.laeta and class II PLD (represented by SMase D 1 ) from L.intermedia, showing the differences between class I and class II (see text). Amino acids involved in metal-ion binding and catalysis are boxed in light gray, cysteines in yellow, and the extended hydrophobic loop in blue.